Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs12722933 chr1:213049117 A/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs12731517 chr1:213055634 T/C LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs12735221 chr1:213051998 A/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs12744746 chr1:213055505 G/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs12754236 chr1:63946264 A/G ITGB3BP chr1:63906441-64059392:- 0.57 6.15 1.11E-7 Box Plot
ACC rs12754609 chr1:213067641 G/A LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs12755947 chr1:213067783 C/T LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs12756625 chr1:213052118 G/A LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs12783144 chr10:69540056 G/T SIRT1 chr10:69644427-69678147:+ 0.58 5.16 3.98E-6 Box Plot
ACC rs12810024 chr12:57331444 A/G SLC26A10 chr12:58013310-58019934:+ 0.74 5.4 1.69E-6 Box Plot
ACC rs1284863 chr1:213093766 G/T LQK1 chr1:213029947-213031480:- 0.64 5.21 3.24E-6 Box Plot
ACC rs12878043 chr14:95528862 C/T GLRX5 chr14:95999840-96011061:+ 0.54 5.58 8.9E-7 Box Plot
ACC rs12878756 chr14:74412322 C/T LIN52 chr14:74551499-74667938:+ 0.56 5.51 1.15E-6 Box Plot
ACC rs12879092 chr14:74412505 C/T LIN52 chr14:74551499-74667938:+ 0.56 5.51 1.15E-6 Box Plot
ACC rs12879465 chr14:64389298 A/G SYNE2 chr14:64319701-64693151:+ 1.01 5.25 2.85E-6 Box Plot